HCSGD entry for SMCP
1. General information
| Official gene symbol | SMCP |
|---|---|
| Entrez ID | 4184 |
| Gene full name | sperm mitochondria-associated cysteine-rich protein |
| Other gene symbols | HSMCSGEN1 MCS MCSP |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0005737 | Cytoplasm | IDA ISS | cellular_component |
| GO:0005739 | Mitochondrion | ISS | cellular_component |
| GO:0007341 | Penetration of zona pellucida | ISS | biological_process |
| GO:0030317 | Sperm motility | ISS | biological_process |
| GO:0031966 | Mitochondrial membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0827256563 | 0.9234018008 | 0.6066932293 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0354366587 |
| GSE13712_SHEAR | Up | 0.0015651659 |
| GSE13712_STATIC | Down | -0.0545839280 |
| GSE19018 | Up | 0.3256608482 |
| GSE19899_A1 | Up | 0.2244417132 |
| GSE19899_A2 | Up | 0.4837431320 |
| PubMed_21979375_A1 | Up | 1.6597427492 |
| PubMed_21979375_A2 | Up | 0.8008049581 |
| GSE35957 | Up | 0.1729255193 |
| GSE36640 | Up | 0.0556673954 |
| GSE54402 | Up | 0.6963956354 |
| GSE9593 | Down | -0.1273021365 |
| GSE43922 | Up | 0.0183353000 |
| GSE24585 | Down | -0.0902785891 |
| GSE37065 | Up | 0.0100132689 |
| GSE28863_A1 | Down | -0.2926009161 |
| GSE28863_A2 | Up | 0.0724703989 |
| GSE28863_A3 | Down | -0.1142037042 |
| GSE28863_A4 | Up | 0.1152020241 |
| GSE48662 | Down | -0.1047877026 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: 1 abstracts the gene occurs.
PubMed ID of the article | Sentenece the gene occurs |
|---|---|
| 24028184 | 4-fold larger than non-aneurysmal SMC (P < 0 |
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