HCSGD entry for LSAMP
1. General information
| Official gene symbol | LSAMP |
|---|---|
| Entrez ID | 4045 |
| Gene full name | limbic system-associated membrane protein |
| Other gene symbols | IGLON3 LAMP |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0007155 | Cell adhesion | IEA | biological_process |
| GO:0007399 | Nervous system development | TAS | biological_process |
| GO:0031225 | Anchored component of membrane | IEA | cellular_component |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9649781087 | 0.0082858440 | 0.9999902473 | 0.1821985798 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0199763652 |
| GSE13712_SHEAR | Down | -0.0121368341 |
| GSE13712_STATIC | Down | -0.0302374793 |
| GSE19018 | Down | -0.9979961846 |
| GSE19899_A1 | Down | -0.0046792559 |
| GSE19899_A2 | Down | -1.7154924861 |
| PubMed_21979375_A1 | Down | -1.0407894775 |
| PubMed_21979375_A2 | Down | -1.1610333682 |
| GSE35957 | Up | 0.4345953305 |
| GSE36640 | Down | -1.3301649076 |
| GSE54402 | Down | -0.0876661552 |
| GSE9593 | Down | -0.0327356425 |
| GSE43922 | Down | -1.4477085948 |
| GSE24585 | Down | -0.6181856019 |
| GSE37065 | Up | 0.1725600496 |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Up | 0.3070502699 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018263 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029724 | Microarray | Functional MTI (Weak) | 19088304 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
