HCSGD entry for SOHLH1
1. General information
| Official gene symbol | SOHLH1 |
|---|---|
| Entrez ID | 402381 |
| Gene full name | spermatogenesis and oogenesis specific basic helix-loop-helix 1 |
| Other gene symbols | C9orf157 NOHLH SPATA27 TEB2 bA100C15.3 bHLHe80 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001541 | Ovarian follicle development | IEA | biological_process |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0007283 | Spermatogenesis | IEA | biological_process |
| GO:0030154 | Cell differentiation | IEA | biological_process |
| GO:0045893 | Positive regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0046983 | Protein dimerization activity | IEA | molecular_function |
| GO:0048477 | Oogenesis | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1818498043 | 0.9769306979 | 0.8356203490 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0992461649 |
| GSE13712_SHEAR | Up | 0.1834597809 |
| GSE13712_STATIC | Up | 0.0813152187 |
| GSE19018 | Up | 0.0609085353 |
| GSE19899_A1 | Up | 0.0945121213 |
| GSE19899_A2 | Up | 0.2069823474 |
| PubMed_21979375_A1 | Up | 0.1841978057 |
| PubMed_21979375_A2 | Up | 0.1631487549 |
| GSE35957 | Up | 0.2013541901 |
| GSE36640 | Up | 0.1383374387 |
| GSE54402 | Down | -0.0184139559 |
| GSE9593 | Down | -0.0208556906 |
| GSE43922 | Up | 0.1298082302 |
| GSE24585 | Up | 0.0615893331 |
| GSE37065 | Down | -0.0772013556 |
| GSE28863_A1 | Down | -0.0737083697 |
| GSE28863_A2 | Up | 0.0084403011 |
| GSE28863_A3 | Up | 0.4786370618 |
| GSE28863_A4 | Up | 0.2328094111 |
| GSE48662 | Up | 0.0636878190 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
