HCSGD entry for PTPLAD2
1. General information
| Official gene symbol | PTPLAD2 |
|---|---|
| Entrez ID | 401494 |
| Gene full name | protein tyrosine phosphatase-like A domain containing 2 |
| Other gene symbols | HACD4 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005789 | Endoplasmic reticulum membrane | IEA | cellular_component |
| GO:0006633 | Fatty acid biosynthetic process | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0016829 | Lyase activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9886618290 | 0.0006212606 | 0.9999902473 | 0.0464551136 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.5950367406 |
| GSE13712_SHEAR | Down | -0.6754134028 |
| GSE13712_STATIC | Down | -0.4819560620 |
| GSE19018 | Down | -0.0999244366 |
| GSE19899_A1 | Down | -0.2911711315 |
| GSE19899_A2 | Down | -1.2368015187 |
| PubMed_21979375_A1 | Down | -1.0117722096 |
| PubMed_21979375_A2 | Down | -0.8771633887 |
| GSE35957 | Down | -0.7670201741 |
| GSE36640 | Down | -0.9441535788 |
| GSE54402 | Down | -1.0655209117 |
| GSE9593 | Up | 0.1607538077 |
| GSE43922 | Down | -2.3610129414 |
| GSE24585 | Up | 0.9373043415 |
| GSE37065 | Down | -0.2280524873 |
| GSE28863_A1 | Down | -0.1265476992 |
| GSE28863_A2 | Down | -0.7065545245 |
| GSE28863_A3 | Down | -0.7713616091 |
| GSE28863_A4 | Down | -0.0722617884 |
| GSE48662 | Down | -0.1718653501 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017226 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049842 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
