HCSGD entry for PRICKLE3
1. General information
| Official gene symbol | PRICKLE3 |
|---|---|
| Entrez ID | 4007 |
| Gene full name | prickle homolog 3 (Drosophila) |
| Other gene symbols | LMO6 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005575 | Cellular_component | ND | cellular_component |
| GO:0008150 | Biological_process | ND | biological_process |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8577825501 | 0.2660516888 | 0.9999902473 | 0.9880009170 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1909518480 |
| GSE13712_SHEAR | Up | 0.3852770646 |
| GSE13712_STATIC | Down | -0.0421984963 |
| GSE19018 | Down | -0.0828819917 |
| GSE19899_A1 | Down | -0.0575825333 |
| GSE19899_A2 | Up | 0.0988709360 |
| PubMed_21979375_A1 | Up | 0.1790654352 |
| PubMed_21979375_A2 | Down | -0.2848716105 |
| GSE35957 | Down | -0.1782970184 |
| GSE36640 | Down | -0.0563168881 |
| GSE54402 | Up | 0.0100620724 |
| GSE9593 | Up | 0.0817389636 |
| GSE43922 | Up | 0.0562047851 |
| GSE24585 | Down | -0.2949430449 |
| GSE37065 | Down | -0.0435512091 |
| GSE28863_A1 | Down | -0.1604905814 |
| GSE28863_A2 | Down | -0.0759907521 |
| GSE28863_A3 | Up | 0.1409035830 |
| GSE28863_A4 | Down | -0.0289709792 |
| GSE48662 | Down | -0.0878099222 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT028767 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-106b-3p | MIMAT0004672 | MIRT038602 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
