HCSGD entry for LGALS3BP
1. General information
| Official gene symbol | LGALS3BP |
|---|---|
| Entrez ID | 3959 |
| Gene full name | lectin, galactoside-binding, soluble, 3 binding protein |
| Other gene symbols | 90K BTBD17B MAC-2-BP TANGO10B |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005044 | Scavenger receptor activity | IEA | molecular_function |
| GO:0005578 | Proteinaceous extracellular matrix | IEA | cellular_component |
| GO:0005615 | Extracellular space | TAS | cellular_component |
| GO:0006898 | Receptor-mediated endocytosis | TAS | biological_process |
| GO:0006968 | Cellular defense response | TAS | biological_process |
| GO:0007155 | Cell adhesion | IEA | biological_process |
| GO:0007165 | Signal transduction | TAS | biological_process |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0031012 | Extracellular matrix | IDA | cellular_component |
| GO:0070062 | Extracellular vesicular exosome | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0045719616 | 0.2783583678 | 0.1782794074 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1255175043 |
| GSE13712_SHEAR | Up | 3.5273789447 |
| GSE13712_STATIC | Up | 3.8898023767 |
| GSE19018 | Down | -0.1542233624 |
| GSE19899_A1 | Down | -0.9034630142 |
| GSE19899_A2 | Down | -0.3258146186 |
| PubMed_21979375_A1 | Down | -0.1894167021 |
| PubMed_21979375_A2 | Up | 0.3402240075 |
| GSE35957 | Down | -1.2253377485 |
| GSE36640 | Up | 1.6514099386 |
| GSE54402 | Down | -0.5988663313 |
| GSE9593 | Up | 0.5588209517 |
| GSE43922 | Down | -0.7187605478 |
| GSE24585 | Up | 0.2901073582 |
| GSE37065 | Down | -0.0092024621 |
| GSE28863_A1 | Up | 0.1514325049 |
| GSE28863_A2 | Up | 0.3800910572 |
| GSE28863_A3 | Up | 0.4456381030 |
| GSE28863_A4 | Up | 0.0674118333 |
| GSE48662 | Up | 1.0721838972 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-596 | MIMAT0003264 | MIRT007309 | Luciferase reporter assay//Western blot | Functional MTI | 23233740 |
| hsa-miR-1 | MIMAT0000416 | MIRT024048 | Proteomics;Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-7-5p | MIMAT0000252 | MIRT025918 | Microarray | Functional MTI (Weak) | 19073608 |
| hsa-miR-296-3p | MIMAT0004679 | MIRT038443 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-26b-3p | MIMAT0004500 | MIRT038953 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-671-5p | MIMAT0003880 | MIRT039290 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-222-3p | MIMAT0000279 | MIRT046598 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-1260b | MIMAT0015041 | MIRT052728 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
