HCSGD entry for LAMA5

1. General information

Official gene symbolLAMA5
Entrez ID3911
Gene full namelaminin, alpha 5
Other gene symbols
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0001525AngiogenesisNASbiological_process
GO:0001658Branching involved in ureteric bud morphogenesisIEAbiological_process
GO:0001738Morphogenesis of a polarized epitheliumIEAbiological_process
GO:0001755Neural crest cell migrationIEAbiological_process
GO:0001942Hair follicle developmentIEAbiological_process
GO:0005178Integrin bindingIDAmolecular_function
GO:0005198Structural molecule activityICmolecular_function
GO:0005604Basement membraneIDAcellular_component
GO:0005605Basal laminaNAScellular_component
GO:0005606Laminin-1 complexIEAcellular_component
GO:0005610Laminin-5 complexIEAcellular_component
GO:0005615Extracellular spaceIDAcellular_component
GO:0007010Cytoskeleton organizationNASbiological_process
GO:0007229Integrin-mediated signaling pathwayIMPbiological_process
GO:0007517Muscle organ developmentIEAbiological_process
GO:0008037Cell recognitionNASbiological_process
GO:0008283Cell proliferationNASbiological_process
GO:0009790Embryo developmentNASbiological_process
GO:0016331Morphogenesis of embryonic epitheliumIEAbiological_process
GO:0016477Cell migrationIDAbiological_process
GO:0030154Cell differentiationNASbiological_process
GO:0030155Regulation of cell adhesionIEAbiological_process
GO:0030198Extracellular matrix organizationTASbiological_process
GO:0030324Lung developmentIEAbiological_process
GO:0030334Regulation of cell migrationIEAbiological_process
GO:0031012Extracellular matrixIDAcellular_component
GO:0034446Substrate adhesion-dependent cell spreadingIDAbiological_process
GO:0042127Regulation of cell proliferationIEAbiological_process
GO:0042384Cilium assemblyIEAbiological_process
GO:0042475Odontogenesis of dentin-containing toothIEAbiological_process
GO:0043259Laminin-10 complexIDA TAScellular_component
GO:0043260Laminin-11 complexTAScellular_component
GO:0045446Endothelial cell differentiationNASbiological_process
GO:0045995Regulation of embryonic developmentIEAbiological_process
GO:0048041Focal adhesion assemblyNASbiological_process
GO:0060445Branching involved in salivary gland morphogenesisIEAbiological_process
GO:0090002Establishment of protein localization to plasma membraneIEAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.30882456970.55699447970.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0001934778
GSE13712_SHEARUp0.3628610110
GSE13712_STATICUp0.4354217248
GSE19018Down-0.0204607170
GSE19899_A1Down-0.2066322259
GSE19899_A2Down-0.5466542941
PubMed_21979375_A1Down-0.2743388266
PubMed_21979375_A2Down-0.2473359057
GSE35957Down-0.2651732063
GSE36640Up0.5946691626
GSE54402Down-0.1705087457
GSE9593Up0.1182633568
GSE43922Down-0.0516448701
GSE24585Up0.0975185059
GSE37065Up0.0975349202
GSE28863_A1Up0.0892779077
GSE28863_A2Up0.1022482194
GSE28863_A3Up0.4324662671
GSE28863_A4Up0.0751696005
GSE48662Up0.2931613670

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-335-5pMIMAT0000765MIRT018825MicroarrayFunctional MTI (Weak)18185580
hsa-miR-320aMIMAT0000510MIRT044619CLASHFunctional MTI (Weak)23622248
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.