HCSGD entry for LAMA4
1. General information
| Official gene symbol | LAMA4 |
|---|---|
| Entrez ID | 3910 |
| Gene full name | laminin, alpha 4 |
| Other gene symbols | CMD1JJ LAMA3 LAMA4*-1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001568 | Blood vessel development | IEA | biological_process |
| GO:0005102 | Receptor binding | IEA | molecular_function |
| GO:0005201 | Extracellular matrix structural constituent | TAS | molecular_function |
| GO:0005604 | Basement membrane | IDA | cellular_component |
| GO:0005605 | Basal lamina | IEA TAS | cellular_component |
| GO:0005606 | Laminin-1 complex | IEA | cellular_component |
| GO:0007155 | Cell adhesion | IEA | biological_process |
| GO:0030155 | Regulation of cell adhesion | IEA | biological_process |
| GO:0030198 | Extracellular matrix organization | TAS | biological_process |
| GO:0030334 | Regulation of cell migration | IEA | biological_process |
| GO:0031012 | Extracellular matrix | ISS | cellular_component |
| GO:0045995 | Regulation of embryonic development | IEA | biological_process |
| GO:0050873 | Brown fat cell differentiation | IEA | biological_process |
| GO:0070062 | Extracellular vesicular exosome | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1350908210 | 0.2483175981 | 0.7433389597 | 0.9582442556 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0430419078 |
| GSE13712_SHEAR | Down | -0.0874456625 |
| GSE13712_STATIC | Down | -0.1028803167 |
| GSE19018 | Down | -0.2683418115 |
| GSE19899_A1 | Up | 0.1019348725 |
| GSE19899_A2 | Up | 0.5996269307 |
| PubMed_21979375_A1 | Up | 0.2685139579 |
| PubMed_21979375_A2 | Up | 0.8702344393 |
| GSE35957 | Down | -0.4800617709 |
| GSE36640 | Down | -0.1323554407 |
| GSE54402 | Up | 0.0331877062 |
| GSE9593 | Up | 0.2342145975 |
| GSE43922 | Up | 0.1649726943 |
| GSE24585 | Down | -0.4928581282 |
| GSE37065 | Down | -0.3576592642 |
| GSE28863_A1 | Up | 0.5581131732 |
| GSE28863_A2 | Up | 0.9194824373 |
| GSE28863_A3 | Down | -0.4752682407 |
| GSE28863_A4 | Down | -0.3856209504 |
| GSE48662 | Up | 0.2075867300 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT022144 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-93-3p | MIMAT0004509 | MIRT038757 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
