HCSGD entry for RBM12B
1. General information
| Official gene symbol | RBM12B |
|---|---|
| Entrez ID | 389677 |
| Gene full name | RNA binding motif protein 12B |
| Other gene symbols | MGC:33837 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000166 | Nucleotide binding | IEA | molecular_function |
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9535467535 | 0.0470769576 | 0.9999902473 | 0.4072009859 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0280897455 |
| GSE13712_SHEAR | Down | -0.0092099987 |
| GSE13712_STATIC | Up | 0.1958325028 |
| GSE19018 | Down | -0.3948857305 |
| GSE19899_A1 | Down | -0.1846241041 |
| GSE19899_A2 | Down | -0.5193873836 |
| PubMed_21979375_A1 | Down | -0.2549297567 |
| PubMed_21979375_A2 | Down | -0.4379667879 |
| GSE35957 | Down | -0.1520315452 |
| GSE36640 | Down | -0.5770839003 |
| GSE54402 | Down | -0.2826035036 |
| GSE9593 | Down | -0.2119240709 |
| GSE43922 | Down | -0.4444204440 |
| GSE24585 | Up | 0.0781622752 |
| GSE37065 | Down | -0.0029775593 |
| GSE28863_A1 | Up | 0.2420209276 |
| GSE28863_A2 | Up | 0.2639254090 |
| GSE28863_A3 | Down | -0.7986195922 |
| GSE28863_A4 | Up | 0.2573727067 |
| GSE48662 | Down | -0.2338682584 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-590-3p | MIMAT0004801 | MIRT016226 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-186-5p | MIMAT0000456 | MIRT021106 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-1 | MIMAT0000416 | MIRT023575 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-10a-5p | MIMAT0000253 | MIRT025617 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029115 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT032302 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-106b-5p | MIMAT0000680 | MIRT044375 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-20a-5p | MIMAT0000075 | MIRT050626 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-17-5p | MIMAT0000070 | MIRT051049 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
