HCSGD entry for SLC6A17
1. General information
| Official gene symbol | SLC6A17 |
|---|---|
| Entrez ID | 388662 |
| Gene full name | solute carrier family 6, member 17 |
| Other gene symbols | NTT4 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005328 | Neurotransmitter:sodium symporter activity | IEA | molecular_function |
| GO:0005887 | Integral component of plasma membrane | IEA | cellular_component |
| GO:0008021 | Synaptic vesicle | ISS | cellular_component |
| GO:0015804 | Neutral amino acid transport | ISS | biological_process |
| GO:0015816 | Glycine transport | ISS | biological_process |
| GO:0015820 | Leucine transport | ISS | biological_process |
| GO:0015824 | Proline transport | ISS | biological_process |
| GO:0030054 | Cell junction | IEA | cellular_component |
| GO:0030672 | Synaptic vesicle membrane | IEA | cellular_component |
| GO:0032328 | Alanine transport | ISS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3026033889 | 0.2906661829 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2405935967 |
| GSE13712_SHEAR | Down | -0.0721444437 |
| GSE13712_STATIC | Down | -0.2785423981 |
| GSE19018 | Up | 0.0428242763 |
| GSE19899_A1 | Down | -0.0486105015 |
| GSE19899_A2 | Up | 0.1832268740 |
| PubMed_21979375_A1 | Up | 0.1896658556 |
| PubMed_21979375_A2 | Down | -0.1828588508 |
| GSE35957 | Down | -0.0163196540 |
| GSE36640 | Up | 0.0805561633 |
| GSE54402 | Up | 0.3181337250 |
| GSE9593 | Up | 0.1690806810 |
| GSE43922 | Up | 0.6962153404 |
| GSE24585 | Down | -0.1272777635 |
| GSE37065 | Up | 0.0958981580 |
| GSE28863_A1 | Down | -0.6293033864 |
| GSE28863_A2 | Up | 0.0502719596 |
| GSE28863_A3 | Up | 0.2294190955 |
| GSE28863_A4 | Down | -0.3551079444 |
| GSE48662 | Up | 1.0424251304 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
