HCSGD entry for NHLRC3
1. General information
| Official gene symbol | NHLRC3 |
|---|---|
| Entrez ID | 387921 |
| Gene full name | NHL repeat containing 3 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005576 | Extracellular region | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8932483948 | 0.0180169143 | 0.9999902473 | 0.2627937396 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0858380820 |
| GSE13712_SHEAR | Up | 0.0141784984 |
| GSE13712_STATIC | Up | 0.2352668035 |
| GSE19018 | Down | -0.4193101969 |
| GSE19899_A1 | Down | -0.1410918693 |
| GSE19899_A2 | Down | -1.3551696765 |
| PubMed_21979375_A1 | Down | -1.0938245777 |
| PubMed_21979375_A2 | Down | -0.8143635575 |
| GSE35957 | Down | -0.3885238371 |
| GSE36640 | Down | -0.3186865319 |
| GSE54402 | Down | -1.3465573516 |
| GSE9593 | Up | 0.0525486157 |
| GSE43922 | Down | -0.5578853093 |
| GSE24585 | Up | 0.1329405438 |
| GSE37065 | Up | 0.3422058001 |
| GSE28863_A1 | Up | 0.2569141574 |
| GSE28863_A2 | Up | 0.3005752450 |
| GSE28863_A3 | Down | -0.4639235037 |
| GSE28863_A4 | Up | 0.0988612751 |
| GSE48662 | Down | -0.0118368343 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018575 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-196a-5p | MIMAT0000226 | MIRT026034 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026785 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-96-5p | MIMAT0000095 | MIRT027923 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-93-5p | MIMAT0000093 | MIRT028124 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031913 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-let-7d-5p | MIMAT0000065 | MIRT032166 | Sequencing | Functional MTI (Weak) | 20371350 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
