HCSGD entry for SHISA2
1. General information
| Official gene symbol | SHISA2 |
|---|---|
| Entrez ID | 387914 |
| Gene full name | shisa homolog 2 (Xenopus laevis) |
| Other gene symbols | C13orf13 PRO28631 TMEM46 WGAR9166 bA398O19.2 hShisa |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005789 | Endoplasmic reticulum membrane | IEA | cellular_component |
| GO:0007275 | Multicellular organismal development | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0029723415 | 0.1396909008 | 0.1465074906 | 0.7192061400 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.5190780679 |
| GSE13712_SHEAR | Down | -2.5994055540 |
| GSE13712_STATIC | Down | -2.1490642320 |
| GSE19018 | Down | -0.0680613226 |
| GSE19899_A1 | Up | 1.0288470306 |
| GSE19899_A2 | Up | 3.8766908250 |
| PubMed_21979375_A1 | Up | 3.1064101556 |
| PubMed_21979375_A2 | Up | 3.3201444950 |
| GSE35957 | Down | -2.0033180220 |
| GSE36640 | Down | -0.0979010200 |
| GSE54402 | Up | 3.2236643619 |
| GSE9593 | Down | -0.4709984371 |
| GSE43922 | Up | 0.0520714837 |
| GSE24585 | Up | 0.5554986198 |
| GSE37065 | Down | -0.0338964261 |
| GSE28863_A1 | Down | -0.0500481719 |
| GSE28863_A2 | Down | -0.0552141001 |
| GSE28863_A3 | Up | 0.2981361870 |
| GSE28863_A4 | Up | 0.1982603848 |
| GSE48662 | Down | -0.2482194824 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-106b-5p | MIMAT0000680 | MIRT044314 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-222-3p | MIMAT0000279 | MIRT046670 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-183-5p | MIMAT0000261 | MIRT047100 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
