HCSGD entry for NSUN4
1. General information
| Official gene symbol | NSUN4 |
|---|---|
| Entrez ID | 387338 |
| Gene full name | NOP2/Sun domain family, member 4 |
| Other gene symbols | RP4-603I14.2 SHTAP |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005762 | Mitochondrial large ribosomal subunit | IDA | cellular_component |
| GO:0006364 | RRNA processing | IEA | biological_process |
| GO:0008168 | Methyltransferase activity | IEA | molecular_function |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4359112306 | 0.4668054481 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0409534058 |
| GSE13712_SHEAR | Up | 0.0637578930 |
| GSE13712_STATIC | Down | -0.0012858347 |
| GSE19018 | Down | -0.2589268667 |
| GSE19899_A1 | Up | 0.0819699549 |
| GSE19899_A2 | Up | 0.2752678202 |
| PubMed_21979375_A1 | Down | -0.2230280901 |
| PubMed_21979375_A2 | Up | 0.3340276152 |
| GSE35957 | Down | -0.3280601432 |
| GSE36640 | Down | -0.1359997461 |
| GSE54402 | Down | -0.0208620948 |
| GSE9593 | Up | 0.0494595866 |
| GSE43922 | Up | 0.5519114937 |
| GSE24585 | Up | 0.2643571066 |
| GSE37065 | Up | 0.0468334949 |
| GSE28863_A1 | Up | 0.0671347282 |
| GSE28863_A2 | Up | 0.1811515692 |
| GSE28863_A3 | Down | -0.7193440809 |
| GSE28863_A4 | Down | -0.2052214105 |
| GSE48662 | Up | 0.1124129739 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | MIRT005275 | pSILAC//Proteomics;Other | Functional MTI (Weak) | 18668040 |
| hsa-miR-3200-3p | MIMAT0015085 | MIRT052818 | CLASH | Functional MTI (Weak) | 23622248 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
