HCSGD entry for GALNT18
1. General information
| Official gene symbol | GALNT18 |
|---|---|
| Entrez ID | 374378 |
| Gene full name | UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 18 |
| Other gene symbols | GALNACT18 GALNT15 GALNTL4 GalNAc-T15 GalNAc-T18 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | IEA | cellular_component |
| GO:0004653 | Polypeptide N-acetylgalactosaminyltransferase activity | IEA | molecular_function |
| GO:0006486 | Protein glycosylation | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0462456670 | 0.9391072262 | 0.4772981989 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0995200150 |
| GSE13712_SHEAR | Down | -0.0882000718 |
| GSE13712_STATIC | Up | 0.0809860559 |
| GSE19018 | Down | -0.1446205611 |
| GSE19899_A1 | Up | 0.2781730917 |
| GSE19899_A2 | Up | 0.4568506969 |
| PubMed_21979375_A1 | Up | 0.5052143455 |
| PubMed_21979375_A2 | Up | 1.0313199512 |
| GSE35957 | Down | -0.2989110463 |
| GSE36640 | Up | 0.4830752524 |
| GSE54402 | Up | 0.1291175693 |
| GSE9593 | Down | -0.0918817162 |
| GSE43922 | Up | 0.8379470039 |
| GSE24585 | Down | -0.3249347621 |
| GSE37065 | Down | -0.0217599672 |
| GSE28863_A1 | Down | -0.0614401680 |
| GSE28863_A2 | Up | 0.0983170160 |
| GSE28863_A3 | Up | 0.1631122322 |
| GSE28863_A4 | Up | 0.0398411796 |
| GSE48662 | Up | 1.0826849082 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-125b-5p | MIMAT0000423 | MIRT046030 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
