HCSGD entry for HILS1
1. General information
| Official gene symbol | HILS1 |
|---|---|
| Entrez ID | 373861 |
| Gene full name | histone linker H1 domain, spermatid-specific 1, pseudogene |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000786 | Nucleosome | IDA | cellular_component |
| GO:0001673 | Male germ cell nucleus | IDA | cellular_component |
| GO:0003676 | Nucleic acid binding | IDA | molecular_function |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0006334 | Nucleosome assembly | IEA | biological_process |
| GO:0006338 | Chromatin remodeling | NAS | biological_process |
| GO:0006342 | Chromatin silencing | IDA | biological_process |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | NAS | biological_process |
| GO:0007275 | Multicellular organismal development | IEA | biological_process |
| GO:0007281 | Germ cell development | IDA | biological_process |
| GO:0007283 | Spermatogenesis | IDA | biological_process |
| GO:0030261 | Chromosome condensation | IDA | biological_process |
| GO:0042393 | Histone binding | IDA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7512297633 | 0.4966223130 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0268308724 |
| GSE13712_SHEAR | Up | 0.0020291477 |
| GSE13712_STATIC | Up | 0.0140114760 |
| GSE19018 | Up | 0.1119053288 |
| GSE19899_A1 | Up | 0.0044116043 |
| GSE19899_A2 | Down | -0.0349260396 |
| PubMed_21979375_A1 | Down | -0.5140106491 |
| PubMed_21979375_A2 | Down | -0.4477154501 |
| GSE35957 | Down | -0.0448437271 |
| GSE36640 | Down | -0.0910637186 |
| GSE54402 | Down | -0.1573552429 |
| GSE9593 | Up | 0.1001770732 |
| GSE43922 | Up | 0.0545814397 |
| GSE24585 | Down | -0.1872872694 |
| GSE37065 | Up | 0.0510302040 |
| GSE28863_A1 | Down | -0.0346257009 |
| GSE28863_A2 | Down | -0.0621297799 |
| GSE28863_A3 | Up | 0.4173754238 |
| GSE28863_A4 | Up | 0.0566907334 |
| GSE48662 | Up | 0.2205386939 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
