HCSGD entry for ITGA9
1. General information
| Official gene symbol | ITGA9 |
|---|---|
| Entrez ID | 3680 |
| Gene full name | integrin, alpha 9 |
| Other gene symbols | ALPHA-RLC ITGA4L RLC |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005518 | Collagen binding | IEA | molecular_function |
| GO:0005886 | Plasma membrane | TAS | cellular_component |
| GO:0007155 | Cell adhesion | IEA IGI | biological_process |
| GO:0007229 | Integrin-mediated signaling pathway | IEA | biological_process |
| GO:0007411 | Axon guidance | TAS | biological_process |
| GO:0008305 | Integrin complex | IEA TAS | cellular_component |
| GO:0009925 | Basal plasma membrane | IEA | cellular_component |
| GO:0030198 | Extracellular matrix organization | TAS | biological_process |
| GO:0030593 | Neutrophil chemotaxis | IEA | biological_process |
| GO:0034679 | Alpha9-beta1 integrin complex | IEA | cellular_component |
| GO:0042060 | Wound healing | IEA | biological_process |
| GO:0043236 | Laminin binding | IEA | molecular_function |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6875323088 | 0.6608771931 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0193646375 |
| GSE13712_SHEAR | Down | -0.5206529980 |
| GSE13712_STATIC | Up | 0.0485562881 |
| GSE19018 | Down | -0.1022138025 |
| GSE19899_A1 | Up | 0.0138805187 |
| GSE19899_A2 | Up | 0.0834784531 |
| PubMed_21979375_A1 | Up | 0.0095812338 |
| PubMed_21979375_A2 | Down | -0.0540360736 |
| GSE35957 | Up | 0.1164103098 |
| GSE36640 | Up | 0.0639113694 |
| GSE54402 | Down | -0.0364575037 |
| GSE9593 | Down | -0.1051533081 |
| GSE43922 | Up | 0.0213315629 |
| GSE24585 | Up | 0.0021371878 |
| GSE37065 | Down | -0.0687690828 |
| GSE28863_A1 | Down | -0.0855171384 |
| GSE28863_A2 | Up | 0.1594375721 |
| GSE28863_A3 | Up | 0.1573983170 |
| GSE28863_A4 | Up | 0.0682790081 |
| GSE48662 | Up | 0.9078017659 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-194-5p | MIMAT0000460 | MIRT005895 | Luciferase reporter assay//qRT-PCR//Western blot | Functional MTI | 20979124 |
| hsa-miR-484 | MIMAT0002174 | MIRT041874 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
