HCSGD entry for NUP43
1. General information
| Official gene symbol | NUP43 |
|---|---|
| Entrez ID | 348995 |
| Gene full name | nucleoporin 43kDa |
| Other gene symbols | bA350J20.1 p42 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000278 | Mitotic cell cycle | TAS | biological_process |
| GO:0000776 | Kinetochore | IDA | cellular_component |
| GO:0000777 | Condensed chromosome kinetochore | IEA | cellular_component |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005635 | Nuclear envelope | TAS | cellular_component |
| GO:0005829 | Cytosol | TAS | cellular_component |
| GO:0005975 | Carbohydrate metabolic process | TAS | biological_process |
| GO:0007059 | Chromosome segregation | IEA | biological_process |
| GO:0007067 | Mitosis | IEA | biological_process |
| GO:0007077 | Mitotic nuclear envelope disassembly | TAS | biological_process |
| GO:0008645 | Hexose transport | TAS | biological_process |
| GO:0010827 | Regulation of glucose transport | TAS | biological_process |
| GO:0015031 | Protein transport | IEA | biological_process |
| GO:0015758 | Glucose transport | TAS | biological_process |
| GO:0016032 | Viral process | TAS | biological_process |
| GO:0019221 | Cytokine-mediated signaling pathway | TAS | biological_process |
| GO:0031080 | Nuclear pore outer ring | IDA NAS | cellular_component |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
| GO:0051028 | MRNA transport | IEA | biological_process |
| GO:0055085 | Transmembrane transport | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9491190266 | 0.0357189696 | 0.9999902473 | 0.3572032675 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1471531278 |
| GSE13712_SHEAR | Up | 0.0817020356 |
| GSE13712_STATIC | Down | -0.1622456241 |
| GSE19018 | Down | -0.0369158589 |
| GSE19899_A1 | Down | -0.1305275706 |
| GSE19899_A2 | Down | -0.9505278709 |
| PubMed_21979375_A1 | Up | 0.2830214063 |
| PubMed_21979375_A2 | Down | -1.1533944063 |
| GSE35957 | Down | -0.2065579759 |
| GSE36640 | Down | -0.9433407992 |
| GSE54402 | Up | 0.1214733594 |
| GSE9593 | Down | -0.3643998484 |
| GSE43922 | Down | -0.0834987210 |
| GSE24585 | Down | -0.2439750987 |
| GSE37065 | Down | -0.3242070860 |
| GSE28863_A1 | Down | -0.0374396768 |
| GSE28863_A2 | Up | 0.3331936275 |
| GSE28863_A3 | Down | -0.7422299628 |
| GSE28863_A4 | Down | -0.0783594200 |
| GSE48662 | Up | 0.0774556487 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-32-5p | MIMAT0000090 | MIRT028263 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-1260b | MIMAT0015041 | MIRT052742 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
