HCSGD entry for LRRTM1
1. General information
| Official gene symbol | LRRTM1 |
|---|---|
| Entrez ID | 347730 |
| Gene full name | leucine rich repeat transmembrane neuronal 1 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0005783 | Endoplasmic reticulum | IDA | cellular_component |
| GO:0007626 | Locomotory behavior | IEA | biological_process |
| GO:0008150 | Biological_process | ND | biological_process |
| GO:0009986 | Cell surface | IDA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0030054 | Cell junction | IEA | cellular_component |
| GO:0030424 | Axon | IDA | cellular_component |
| GO:0030426 | Growth cone | IDA | cellular_component |
| GO:0035418 | Protein localization to synapse | IEA | biological_process |
| GO:0035640 | Exploration behavior | IEA | biological_process |
| GO:0045211 | Postsynaptic membrane | IEA | cellular_component |
| GO:0050808 | Synapse organization | IEA | biological_process |
| GO:0060076 | Excitatory synapse | IEA | cellular_component |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5931883629 | 0.8390172714 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0419806894 |
| GSE13712_SHEAR | Down | -0.1302113084 |
| GSE13712_STATIC | Up | 0.1642349804 |
| GSE19018 | Up | 0.1488846681 |
| GSE19899_A1 | Down | -0.1013289305 |
| GSE19899_A2 | Up | 0.0766756142 |
| PubMed_21979375_A1 | Down | -0.0329274806 |
| PubMed_21979375_A2 | Up | 0.0837747762 |
| GSE35957 | Up | 0.2475917124 |
| GSE36640 | Up | 0.0195515713 |
| GSE54402 | Down | -0.1279998754 |
| GSE9593 | Up | 0.0548772460 |
| GSE43922 | Up | 0.0625783878 |
| GSE24585 | Up | 0.0151165016 |
| GSE37065 | Down | -0.1105407899 |
| GSE28863_A1 | Down | -0.1016831420 |
| GSE28863_A2 | Up | 0.2614747225 |
| GSE28863_A3 | Up | 0.1032264936 |
| GSE28863_A4 | Up | 0.1135769249 |
| GSE48662 | Down | -0.0152082067 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-9-5p | MIMAT0000441 | MIRT021433 | Microarray | Functional MTI (Weak) | 17612493 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
