HCSGD entry for IFRD1
1. General information
| Official gene symbol | IFRD1 |
|---|---|
| Entrez ID | 3475 |
| Gene full name | interferon-related developmental regulator 1 |
| Other gene symbols | PC4 TIS7 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0007275 | Multicellular organismal development | IEA | biological_process |
| GO:0007518 | Myoblast fate determination | TAS | biological_process |
| GO:0007527 | Adult somatic muscle development | IEA | biological_process |
| GO:0042692 | Muscle cell differentiation | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0692090080 | 0.6105770715 | 0.5628659870 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3604878951 |
| GSE13712_SHEAR | Up | 0.6078493788 |
| GSE13712_STATIC | Down | -0.0460095816 |
| GSE19018 | Down | -0.2110903150 |
| GSE19899_A1 | Up | 0.0239209834 |
| GSE19899_A2 | Down | -0.3951250362 |
| PubMed_21979375_A1 | Up | 0.9085657222 |
| PubMed_21979375_A2 | Up | 0.0601409298 |
| GSE35957 | Up | 0.1003845737 |
| GSE36640 | Up | 0.3959009014 |
| GSE54402 | Up | 0.1789011996 |
| GSE9593 | Up | 0.3219571734 |
| GSE43922 | Up | 0.3501072954 |
| GSE24585 | Up | 0.3050805428 |
| GSE37065 | Up | 0.0299638560 |
| GSE28863_A1 | Up | 0.1418189488 |
| GSE28863_A2 | Up | 0.3217006312 |
| GSE28863_A3 | Down | -0.4709659672 |
| GSE28863_A4 | Down | -0.1518948336 |
| GSE48662 | Down | -0.2692652427 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-16-5p | MIMAT0000069 | MIRT001454 | pSILAC//Proteomics;Other | Functional MTI (Weak) | 18668040 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT001623 | pSILAC//Proteomics;Other | Functional MTI (Weak) | 18668040 |
| hsa-miR-30a-5p | MIMAT0000087 | MIRT005143 | pSILAC//Proteomics;Other | Functional MTI (Weak) | 18668040 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026426 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029297 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
