HCSGD entry for TGM6

1. General information

Official gene symbolTGM6
Entrez ID343641
Gene full nametransglutaminase 6
Other gene symbolsSCA35 TG6 TGM3L TGY dJ734P14.3
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003810Protein-glutamine gamma-glutamyltransferase activityIDAmolecular_function
GO:0005737CytoplasmIEAcellular_component
GO:0008219Cell deathIEAbiological_process
GO:0018149Peptide cross-linkingIEAbiological_process
GO:0046872Metal ion bindingIEAmolecular_function
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.76162671630.60271448650.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.1960119329
GSE13712_SHEARUp0.1115608297
GSE13712_STATICUp0.1001607839
GSE19018Down-0.1020107543
GSE19899_A1Down-0.0541213775
GSE19899_A2Down-0.1741236673
PubMed_21979375_A1Down-0.0481622541
PubMed_21979375_A2Down-0.2144300027
GSE35957Up0.0215713101
GSE36640Down-0.1005958609
GSE54402Up0.0539930047
GSE9593Up0.1493300801
GSE43922Up0.0281795879
GSE24585Down-0.0756724137
GSE37065Down-0.0420392970
GSE28863_A1Down-0.0527225512
GSE28863_A2Down-0.0181646026
GSE28863_A3Up0.3771165024
GSE28863_A4Up0.1190287063
GSE48662Up0.1037099696

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.