HCSGD entry for KCNT2
1. General information
| Official gene symbol | KCNT2 |
|---|---|
| Entrez ID | 343450 |
| Gene full name | potassium channel, subfamily T, member 2 |
| Other gene symbols | KCa4.2 SLICK SLO2.1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005249 | Voltage-gated potassium channel activity | IBA | molecular_function |
| GO:0005524 | ATP binding | IEA | molecular_function |
| GO:0008076 | Voltage-gated potassium channel complex | IBA | cellular_component |
| GO:0015269 | Calcium-activated potassium channel activity | IBA IEA | molecular_function |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0034765 | Regulation of ion transmembrane transport | IBA | biological_process |
| GO:0051049 | Regulation of transport | IBA | biological_process |
| GO:0071805 | Potassium ion transmembrane transport | IBA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9827762243 | 0.0147444322 | 0.9999902473 | 0.2394128316 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2795748493 |
| GSE13712_SHEAR | Down | -0.3643763984 |
| GSE13712_STATIC | Up | 0.1587908435 |
| GSE19018 | Down | -0.5969292159 |
| GSE19899_A1 | Up | 0.0069134735 |
| GSE19899_A2 | Down | -0.8336145026 |
| PubMed_21979375_A1 | Up | 0.1339014516 |
| PubMed_21979375_A2 | Down | -0.5182612741 |
| GSE35957 | Down | -0.5068923386 |
| GSE36640 | Down | -0.3438795058 |
| GSE54402 | Down | -0.4241183940 |
| GSE9593 | Down | -0.2174446731 |
| GSE43922 | Down | -0.2516545743 |
| GSE24585 | Down | -0.1816751258 |
| GSE37065 | Down | -0.1736708649 |
| GSE28863_A1 | Down | -0.0838020593 |
| GSE28863_A2 | Down | -0.1056235041 |
| GSE28863_A3 | Up | 0.0192292611 |
| GSE28863_A4 | Down | -0.1528810495 |
| GSE48662 | Up | 0.0917739422 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017687 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
