HCSGD entry for ATXN1L
1. General information
| Official gene symbol | ATXN1L |
|---|---|
| Entrez ID | 342371 |
| Gene full name | ataxin 1-like |
| Other gene symbols | BOAT BOAT1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0030425 | Dendrite | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9169758216 | 0.2462734850 | 0.9999902473 | 0.9549434526 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1006036746 |
| GSE13712_SHEAR | Up | 0.0235671064 |
| GSE13712_STATIC | Up | 0.1309820506 |
| GSE19018 | Down | -0.6299778520 |
| GSE19899_A1 | Down | -0.1084466072 |
| GSE19899_A2 | Up | 0.0217568704 |
| PubMed_21979375_A1 | Up | 0.2499246307 |
| PubMed_21979375_A2 | Up | 0.0979991692 |
| GSE35957 | Up | 0.0583988882 |
| GSE36640 | Up | 0.1759742381 |
| GSE54402 | Down | -0.2990665806 |
| GSE9593 | Down | -0.0220363548 |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | Down | -0.1517618987 |
| GSE28863_A2 | Down | -0.1793215347 |
| GSE28863_A3 | Down | -0.3213976932 |
| GSE28863_A4 | Up | 0.0040400163 |
| GSE48662 | Up | 0.1218913082 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-107 | MIMAT0000104 | MIRT048295 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT051885 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
