HCSGD entry for VSIG1


1. General information

Official gene symbolVSIG1
Entrez ID340547
Gene full nameV-set and immunoglobulin domain containing 1
Other gene symbols1700062D20Rik GPA34 dJ889N15.1
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0016021Integral component of membraneIEAcellular_component
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.12836878920.85693445920.72804516681.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.1353482708
GSE13712_SHEARUp1.1947416655
GSE13712_STATICUp0.4866177649
GSE19018Up0.1245336266
GSE19899_A1Up0.0643487863
GSE19899_A2Up0.4097595789
PubMed_21979375_A1Up0.2973530537
PubMed_21979375_A2Up0.4094766132
GSE35957Down-0.0277681531
GSE36640Up0.2502918513
GSE54402Up0.0750285785
GSE9593Down-0.0085103393
GSE43922Up0.3213686337
GSE24585Down-0.1134114127
GSE37065Up0.0404088461
GSE28863_A1Down-0.1471045993
GSE28863_A2Down-0.2700857799
GSE28863_A3Down-0.0114945557
GSE28863_A4Down-0.0693404549
GSE48662Up0.0073188514

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-142-3pMIMAT0000434MIRT021542MicroarrayFunctional MTI (Weak)17612493
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.