HCSGD entry for APOBEC1

1. General information

Official gene symbolAPOBEC1
Entrez ID339
Gene full nameapolipoprotein B mRNA editing enzyme, catalytic polypeptide 1
Other gene symbolsAPOBEC-1 BEDP CDAR1 HEPR
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003723RNA bindingTASmolecular_function
GO:0004126Cytidine deaminase activityTASmolecular_function
GO:0005515Protein bindingIPImolecular_function
GO:0005654NucleoplasmTAScellular_component
GO:0005737CytoplasmIDAcellular_component
GO:0006396RNA processingTASbiological_process
GO:0006397MRNA processingIEAbiological_process
GO:0006629Lipid metabolic processTASbiological_process
GO:0006970Response to osmotic stressIEAbiological_process
GO:0008270Zinc ion bindingIEAmolecular_function
GO:0009972Cytidine deaminationTASbiological_process
GO:0010043Response to zinc ionIEAbiological_process
GO:0010332Response to gamma radiationIEAbiological_process
GO:0010467Gene expressionTASbiological_process
GO:0016554Cytidine to uridine editingTASbiological_process
GO:0016556MRNA modificationTASbiological_process
GO:0017091AU-rich element bindingIEAmolecular_function
GO:0032869Cellular response to insulin stimulusIEAbiological_process
GO:0042127Regulation of cell proliferationIEAbiological_process
GO:0042158Lipoprotein biosynthetic processIEAbiological_process
GO:0042493Response to drugIEAbiological_process
GO:0042953Lipoprotein transportIEAbiological_process
GO:0045471Response to ethanolIEAbiological_process
GO:0048255MRNA stabilizationIEAbiological_process
GO:0051592Response to calcium ionIEAbiological_process
GO:0051607Defense response to virusIEAbiological_process
GO:0080111DNA demethylationISSbiological_process
GO:0090310Negative regulation of methylation-dependent chromatin silencingISSbiological_process
Entries Per Page
Displaying Page of

4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.90748997000.52892955430.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0127894319
GSE13712_SHEARDown-0.1243024631
GSE13712_STATICDown-0.0040321421
GSE19018Down-0.0747865485
GSE19899_A1Up0.1130744958
GSE19899_A2Down-0.0317714454
PubMed_21979375_A1Down-0.1820690344
PubMed_21979375_A2Down-0.1586583262
GSE35957Up0.0138816108
GSE36640Up0.0128033307
GSE54402Down-0.0514332321
GSE9593Down-0.0556857950
GSE43922Up0.0170702818
GSE24585Up0.2319293751
GSE37065Down-0.0804498699
GSE28863_A1Up0.0292679372
GSE28863_A2Up0.0254523035
GSE28863_A3Up0.1912194208
GSE28863_A4Down-0.2562658619
GSE48662Down-0.0687137860

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.