HCSGD entry for CLEC4D
1. General information
| Official gene symbol | CLEC4D |
|---|---|
| Entrez ID | 338339 |
| Gene full name | C-type lectin domain family 4, member D |
| Other gene symbols | CLEC-6 CLEC6 CLECSF8 MCL MPCL |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0030246 | Carbohydrate binding | IEA | molecular_function |
| GO:0045087 | Innate immune response | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6982833783 | 0.8591202538 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0345698762 |
| GSE13712_SHEAR | Down | -0.0722410055 |
| GSE13712_STATIC | Up | 0.1603128615 |
| GSE19018 | Up | 0.0854600152 |
| GSE19899_A1 | Up | 0.0401818091 |
| GSE19899_A2 | Up | 0.0400545941 |
| PubMed_21979375_A1 | Up | 0.0247832948 |
| PubMed_21979375_A2 | Up | 0.1072007085 |
| GSE35957 | Up | 0.1665152509 |
| GSE36640 | Up | 0.0991630534 |
| GSE54402 | Down | -0.0172178896 |
| GSE9593 | Down | -0.0521720835 |
| GSE43922 | Up | 0.1581381075 |
| GSE24585 | Down | -0.0368279210 |
| GSE37065 | Down | -0.0168091382 |
| GSE28863_A1 | Down | -0.0171953516 |
| GSE28863_A2 | Down | -0.0731761438 |
| GSE28863_A3 | Down | -0.0242550211 |
| GSE28863_A4 | Down | -0.0031696655 |
| GSE48662 | Up | 0.0173279846 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-142-3p | MIMAT0000434 | MIRT021599 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-30a-5p | MIMAT0000087 | MIRT049934 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
