HCSGD entry for HOXD11

1. General information

Official gene symbolHOXD11
Entrez ID3237
Gene full namehomeobox D11
Other gene symbolsHOX4 HOX4F
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0001656Metanephros developmentIEAbiological_process
GO:0001658Branching involved in ureteric bud morphogenesisISSbiological_process
GO:0001759Organ inductionIEAbiological_process
GO:0003700Sequence-specific DNA binding transcription factor activityIEAmolecular_function
GO:0005634NucleusIEAcellular_component
GO:0006351Transcription, DNA-templatedIEAbiological_process
GO:0009952Anterior/posterior pattern specificationIEAbiological_process
GO:0009953Dorsal/ventral pattern formationISSbiological_process
GO:0009954Proximal/distal pattern formationIEAbiological_process
GO:0010720Positive regulation of cell developmentIEAbiological_process
GO:0032332Positive regulation of chondrocyte differentiationIEAbiological_process
GO:0035115Embryonic forelimb morphogenesisIEAbiological_process
GO:0042733Embryonic digit morphogenesisIEAbiological_process
GO:0043565Sequence-specific DNA bindingIEAmolecular_function
GO:0048589Developmental growthIEAbiological_process
GO:0060272Embryonic skeletal joint morphogenesisIEAbiological_process
GO:0060351Cartilage development involved in endochondral bone morphogenesisIEAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.54007454880.91801924700.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0988577569
GSE13712_SHEARDown-0.1345968926
GSE13712_STATICUp0.2531075457
GSE19018Down-0.0671898758
GSE19899_A1Up0.0496845150
GSE19899_A2Down-0.0052680936
PubMed_21979375_A1Down-0.1276337953
PubMed_21979375_A2Up0.2069675869
GSE35957Down-0.0450284545
GSE36640Up0.1040231380
GSE54402Up0.2040011162
GSE9593Up0.1479976578
GSE43922--
GSE24585--
GSE37065--
GSE28863_A1--
GSE28863_A2--
GSE28863_A3--
GSE28863_A4--
GSE48662Up0.0204734684

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-744-5pMIMAT0004945MIRT037516CLASHFunctional MTI (Weak)23622248
hsa-let-7b-5pMIMAT0000063MIRT051956CLASHFunctional MTI (Weak)23622248
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.