HCSGD entry for HOXD4

1. General information

Official gene symbolHOXD4
Entrez ID3233
Gene full namehomeobox D4
Other gene symbolsHHO.C13 HOX-5.1 HOX4 HOX4B Hox-4.2
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003700Sequence-specific DNA binding transcription factor activityIEAmolecular_function
GO:0005634NucleusIEAcellular_component
GO:0006351Transcription, DNA-templatedIEAbiological_process
GO:0007275Multicellular organismal developmentNASbiological_process
GO:0043565Sequence-specific DNA bindingIEAmolecular_function
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.70419132630.71220997680.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0289961665
GSE13712_SHEARDown-0.3244838255
GSE13712_STATICDown-0.0398154075
GSE19018Up0.0726828479
GSE19899_A1Up0.1216912513
GSE19899_A2Up0.1112987186
PubMed_21979375_A1Up0.2814129064
PubMed_21979375_A2Down-0.1207409874
GSE35957Up0.0160150264
GSE36640Down-0.0801042097
GSE54402Up0.0842586870
GSE9593Down-0.1657077585
GSE43922--
GSE24585--
GSE37065--
GSE28863_A1--
GSE28863_A2--
GSE28863_A3--
GSE28863_A4--
GSE48662Up0.0894045889

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.