HCSGD entry for HOXC12
1. General information
| Official gene symbol | HOXC12 |
|---|---|
| Entrez ID | 3228 |
| Gene full name | homeobox C12 |
| Other gene symbols | HOC3F HOX3 HOX3F |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0007275 | Multicellular organismal development | IEA | biological_process |
| GO:0043565 | Sequence-specific DNA binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2455018920 | 0.9420760191 | 0.9345728784 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0560305613 |
| GSE13712_SHEAR | Down | -0.0587192966 |
| GSE13712_STATIC | Down | -0.1053225791 |
| GSE19018 | Up | 0.3009549706 |
| GSE19899_A1 | Up | 0.0889174301 |
| GSE19899_A2 | Up | 0.1180630848 |
| PubMed_21979375_A1 | Up | 0.5173545075 |
| PubMed_21979375_A2 | Up | 0.0708837661 |
| GSE35957 | Up | 0.3136667349 |
| GSE36640 | Up | 0.0146157847 |
| GSE54402 | Down | -0.0061543667 |
| GSE9593 | Up | 0.1986341087 |
| GSE43922 | Up | 0.0576813987 |
| GSE24585 | Up | 0.1657595136 |
| GSE37065 | Up | 0.0262726920 |
| GSE28863_A1 | Down | -0.1543459406 |
| GSE28863_A2 | Down | -0.1447959008 |
| GSE28863_A3 | Up | 0.4624783049 |
| GSE28863_A4 | Up | 0.0911592744 |
| GSE48662 | Down | -0.0177484849 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-9-5p | MIMAT0000441 | MIRT021328 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-7-5p | MIMAT0000252 | MIRT025753 | Microarray | Functional MTI (Weak) | 17612493 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
