HCSGD entry for HOXB2
1. General information
| Official gene symbol | HOXB2 |
|---|---|
| Entrez ID | 3212 |
| Gene full name | homeobox B2 |
| Other gene symbols | HOX2 HOX2H Hox-2.8 K8 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0002011 | Morphogenesis of an epithelial sheet | IEA | biological_process |
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0007275 | Multicellular organismal development | TAS | biological_process |
| GO:0008015 | Blood circulation | TAS | biological_process |
| GO:0009952 | Anterior/posterior pattern specification | IEA | biological_process |
| GO:0009953 | Dorsal/ventral pattern formation | IEA | biological_process |
| GO:0021569 | Rhombomere 3 development | IEA | biological_process |
| GO:0021570 | Rhombomere 4 development | IEA | biological_process |
| GO:0021612 | Facial nerve structural organization | IEA | biological_process |
| GO:0043565 | Sequence-specific DNA binding | IEA | molecular_function |
| GO:0048704 | Embryonic skeletal system morphogenesis | IEA | biological_process |
| GO:0048857 | Neural nucleus development | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1165430531 | 0.0866865393 | 0.7001690237 | 0.5589604116 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.4225138445 |
| GSE13712_SHEAR | Up | 0.5917308452 |
| GSE13712_STATIC | Down | -0.0707387876 |
| GSE19018 | Down | -0.4106844268 |
| GSE19899_A1 | Down | -0.3949642352 |
| GSE19899_A2 | Up | 0.6493568051 |
| PubMed_21979375_A1 | Up | 0.4544228938 |
| PubMed_21979375_A2 | Down | -0.1233773603 |
| GSE35957 | Down | -1.4462177147 |
| GSE36640 | Up | 0.1878316612 |
| GSE54402 | Up | 0.3771865535 |
| GSE9593 | Down | -0.1311481823 |
| GSE43922 | Down | -0.0227779946 |
| GSE24585 | Up | 1.5482932364 |
| GSE37065 | Down | -0.0941170566 |
| GSE28863_A1 | Down | -0.5253326714 |
| GSE28863_A2 | Down | -0.2825244163 |
| GSE28863_A3 | Down | -0.2689988449 |
| GSE28863_A4 | Up | 0.0659501650 |
| GSE48662 | Down | -0.0360076603 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-17-3p | MIMAT0000071 | MIRT050781 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
