HCSGD entry for HNRNPH1
1. General information
| Official gene symbol | HNRNPH1 |
|---|---|
| Entrez ID | 3187 |
| Gene full name | heterogeneous nuclear ribonucleoprotein H1 (H) |
| Other gene symbols | HNRPH HNRPH1 hnRNPH |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000166 | Nucleotide binding | IEA | molecular_function |
| GO:0000398 | MRNA splicing, via spliceosome | IC TAS | biological_process |
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003723 | RNA binding | IDA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005654 | Nucleoplasm | TAS | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0006396 | RNA processing | TAS | biological_process |
| GO:0008266 | Poly(U) RNA binding | TAS | molecular_function |
| GO:0008380 | RNA splicing | TAS | biological_process |
| GO:0010467 | Gene expression | TAS | biological_process |
| GO:0015629 | Actin cytoskeleton | IDA | cellular_component |
| GO:0043484 | Regulation of RNA splicing | IDA | biological_process |
| GO:0071013 | Catalytic step 2 spliceosome | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9922652255 | 0.0051630941 | 0.9999902473 | 0.1460320856 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0589142944 |
| GSE13712_SHEAR | Down | -0.2661465894 |
| GSE13712_STATIC | Down | -0.7732927344 |
| GSE19018 | Down | -0.4413639386 |
| GSE19899_A1 | Down | -0.4594221758 |
| GSE19899_A2 | Down | -0.7137941907 |
| PubMed_21979375_A1 | Down | -0.7432811365 |
| PubMed_21979375_A2 | Down | -1.1204601966 |
| GSE35957 | Down | -0.8723285996 |
| GSE36640 | Down | -0.4453716919 |
| GSE54402 | Down | -0.2373708147 |
| GSE9593 | Down | -0.5789243307 |
| GSE43922 | Down | -0.4442654629 |
| GSE24585 | Down | -0.0040189739 |
| GSE37065 | Down | -0.1685190987 |
| GSE28863_A1 | Up | 0.3991953736 |
| GSE28863_A2 | Up | 0.3002114919 |
| GSE28863_A3 | Down | -0.4378008830 |
| GSE28863_A4 | Down | -0.1080675513 |
| GSE48662 | Down | -0.5557575611 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | MIRT023563 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-21-5p | MIMAT0000076 | MIRT030723 | Microarray | Functional MTI (Weak) | 18591254 |
| hsa-miR-877-3p | MIMAT0004950 | MIRT036968 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-193b-3p | MIMAT0002819 | MIRT041384 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-331-3p | MIMAT0000760 | MIRT043417 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-149-5p | MIMAT0000450 | MIRT045394 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-222-3p | MIMAT0000279 | MIRT046766 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-30d-5p | MIMAT0000245 | MIRT047811 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-197-3p | MIMAT0000227 | MIRT048075 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
