HCSGD entry for HMMR
1. General information
| Official gene symbol | HMMR |
|---|---|
| Entrez ID | 3161 |
| Gene full name | hyaluronan-mediated motility receptor (RHAMM) |
| Other gene symbols | CD168 IHABP RHAMM |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005540 | Hyaluronic acid binding | IEA | molecular_function |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0005886 | Plasma membrane | TAS | cellular_component |
| GO:0005975 | Carbohydrate metabolic process | TAS | biological_process |
| GO:0009986 | Cell surface | IEA | cellular_component |
| GO:0030203 | Glycosaminoglycan metabolic process | TAS | biological_process |
| GO:0030212 | Hyaluronan metabolic process | TAS | biological_process |
| GO:0030214 | Hyaluronan catabolic process | TAS | biological_process |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8426896812 | 0.0000064625 | 0.9999902473 | 0.0069833333 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -2.3181989767 |
| GSE13712_SHEAR | Down | -0.4724761970 |
| GSE13712_STATIC | Down | -0.9959914228 |
| GSE19018 | Up | 0.2877525537 |
| GSE19899_A1 | Down | -2.7111704625 |
| GSE19899_A2 | Down | -5.1584970513 |
| PubMed_21979375_A1 | Down | -4.1996288116 |
| PubMed_21979375_A2 | Down | -7.1632252731 |
| GSE35957 | Down | -5.0477669558 |
| GSE36640 | Down | -4.8796683017 |
| GSE54402 | Down | -1.5888372670 |
| GSE9593 | Down | -2.4898667911 |
| GSE43922 | Down | -2.1785512150 |
| GSE24585 | Up | 0.2318812495 |
| GSE37065 | Down | -0.3669711429 |
| GSE28863_A1 | Down | -0.6013670757 |
| GSE28863_A2 | Up | 1.7029931165 |
| GSE28863_A3 | Down | -0.4858939784 |
| GSE28863_A4 | Up | 0.0540459384 |
| GSE48662 | Down | -2.1056882021 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Name | Drug | Accession number |
|---|---|---|
| Hyaluronic acid | DB08818 | - |
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-215-5p | MIMAT0000272 | MIRT024628 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026177 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-98-5p | MIMAT0000096 | MIRT027466 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-93-3p | MIMAT0004509 | MIRT038799 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-106b-5p | MIMAT0000680 | MIRT044370 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
