HCSGD entry for H2AFZ
1. General information
| Official gene symbol | H2AFZ |
|---|---|
| Entrez ID | 3015 |
| Gene full name | H2A histone family, member Z |
| Other gene symbols | H2A.Z-1 H2A.z H2A/z H2AZ |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000786 | Nucleosome | IEA | cellular_component |
| GO:0001740 | Barr body | IDA | cellular_component |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0006334 | Nucleosome assembly | IEA | biological_process |
| GO:0046982 | Protein heterodimerization activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9784615592 | 0.0102086965 | 0.9999902473 | 0.2001470632 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2700980244 |
| GSE13712_SHEAR | Down | -0.0040137342 |
| GSE13712_STATIC | Down | -0.1423583240 |
| GSE19018 | Up | 0.3124531545 |
| GSE19899_A1 | Down | -0.3113103379 |
| GSE19899_A2 | Down | -0.5173036803 |
| PubMed_21979375_A1 | Down | -0.2894379387 |
| PubMed_21979375_A2 | Down | -0.6184059939 |
| GSE35957 | Down | -1.2948599968 |
| GSE36640 | Down | -1.6052564739 |
| GSE54402 | Down | -0.2179871479 |
| GSE9593 | Down | -0.4517086673 |
| GSE43922 | Down | -0.1989603831 |
| GSE24585 | Down | -0.0562623686 |
| GSE37065 | Down | -0.3932216804 |
| GSE28863_A1 | Up | 0.0330145430 |
| GSE28863_A2 | Up | 0.1340169019 |
| GSE28863_A3 | Up | 0.1489446226 |
| GSE28863_A4 | Up | 0.0048208314 |
| GSE48662 | Down | -0.9485660079 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-148b-3p | MIMAT0000759 | MIRT043584 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-99b-5p | MIMAT0000689 | MIRT044176 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-197-3p | MIMAT0000227 | MIRT048062 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
