HCSGD entry for HIST1H1C
1. General information
| Official gene symbol | HIST1H1C |
|---|---|
| Entrez ID | 3006 |
| Gene full name | histone cluster 1, H1c |
| Other gene symbols | H1.2 H1C H1F2 H1s-1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000786 | Nucleosome | IEA | cellular_component |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006334 | Nucleosome assembly | IEA | biological_process |
| GO:0016584 | Nucleosome positioning | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0013146575 | 0.0551033927 | 0.0983934659 | 0.4425927373 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 3.8427597536 |
| GSE13712_SHEAR | Up | 1.6003605358 |
| GSE13712_STATIC | Up | 0.8780232309 |
| GSE19018 | Up | 0.5962386066 |
| GSE19899_A1 | Up | 0.8183092736 |
| GSE19899_A2 | Up | 0.3005548677 |
| PubMed_21979375_A1 | Up | 0.8460217445 |
| PubMed_21979375_A2 | Up | 1.1180318162 |
| GSE35957 | Up | 1.2874645015 |
| GSE36640 | Down | -2.3489641906 |
| GSE54402 | Down | -1.3632093567 |
| GSE9593 | Up | 1.2688636759 |
| GSE43922 | Down | -1.5876824440 |
| GSE24585 | Down | -0.0015697308 |
| GSE37065 | Down | -0.2484506735 |
| GSE28863_A1 | Down | -0.3481050625 |
| GSE28863_A2 | Down | -0.2784281884 |
| GSE28863_A3 | Down | -0.0384668950 |
| GSE28863_A4 | Down | -0.5219407818 |
| GSE48662 | Up | 1.1658524699 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-34a-5p | MIMAT0000255 | MIRT025536 | Proteomics | Functional MTI (Weak) | 21566225 |
| hsa-miR-98-5p | MIMAT0000096 | MIRT027797 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-423-5p | MIMAT0004748 | MIRT038090 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-652-3p | MIMAT0003322 | MIRT039500 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-18a-3p | MIMAT0002891 | MIRT040862 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-324-3p | MIMAT0000762 | MIRT042928 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-99b-5p | MIMAT0000689 | MIRT044173 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-186-5p | MIMAT0000456 | MIRT045075 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-27b-3p | MIMAT0000419 | MIRT046184 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT051144 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT051896 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
