HCSGD entry for SLC39A3
1. General information
| Official gene symbol | SLC39A3 |
|---|---|
| Entrez ID | 29985 |
| Gene full name | solute carrier family 39 (zinc transporter), member 3 |
| Other gene symbols | ZIP3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005385 | Zinc ion transmembrane transporter activity | IEA | molecular_function |
| GO:0005886 | Plasma membrane | TAS | cellular_component |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0046873 | Metal ion transmembrane transporter activity | IEA | molecular_function |
| GO:0055085 | Transmembrane transport | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7218880894 | 0.5847291516 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0049028104 |
| GSE13712_SHEAR | Down | -0.1189151852 |
| GSE13712_STATIC | Up | 0.0031613810 |
| GSE19018 | Down | -0.1493826614 |
| GSE19899_A1 | Down | -0.1472829103 |
| GSE19899_A2 | Up | 0.0989623742 |
| PubMed_21979375_A1 | Up | 0.3475886206 |
| PubMed_21979375_A2 | Up | 0.1977765289 |
| GSE35957 | Up | 0.0365124500 |
| GSE36640 | Up | 0.0368098010 |
| GSE54402 | Up | 0.0492482897 |
| GSE9593 | Up | 0.0036786341 |
| GSE43922 | Up | 0.0554045885 |
| GSE24585 | Down | -0.2272776829 |
| GSE37065 | Down | -0.1508731154 |
| GSE28863_A1 | Down | -0.0851318657 |
| GSE28863_A2 | Down | -0.1334750410 |
| GSE28863_A3 | Down | -0.0296995690 |
| GSE28863_A4 | Down | -0.0115600921 |
| GSE48662 | Up | 0.5708530653 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT023150 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-1 | MIMAT0000416 | MIRT024059 | Microarray | Functional MTI (Weak) | 18668037 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
