HCSGD entry for PDZRN4

1. General information

Official gene symbolPDZRN4
Entrez ID29951
Gene full namePDZ domain containing ring finger 4
Other gene symbolsLNX4 SAMCAP3L
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0004842Ubiquitin-protein ligase activityIEAmolecular_function
GO:0008270Zinc ion bindingIEAmolecular_function
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.65902444820.77706257360.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0402365063
GSE13712_SHEARDown-0.1228548180
GSE13712_STATICDown-0.1527510041
GSE19018Up0.0750176513
GSE19899_A1Up0.1270033026
GSE19899_A2Up0.0769185827
PubMed_21979375_A1Up0.1033092329
PubMed_21979375_A2Up0.0129058924
GSE35957Up0.1187658833
GSE36640Up0.2310012006
GSE54402Up0.0396015328
GSE9593Up0.0785019571
GSE43922Up0.0191538524
GSE24585Down-0.2730777983
GSE37065Up0.0098527730
GSE28863_A1Down-0.0797471713
GSE28863_A2Down-0.0544469977
GSE28863_A3Up0.2149173831
GSE28863_A4Up0.0263658411
GSE48662Up0.1403836020

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-128-3pMIMAT0000424MIRT021946MicroarrayFunctional MTI (Weak)17612493
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.