HCSGD entry for SERTAD3
1. General information
| Official gene symbol | SERTAD3 |
|---|---|
| Entrez ID | 29946 |
| Gene full name | SERTA domain containing 3 |
| Other gene symbols | RBT1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IDA | biological_process |
| GO:0030308 | Negative regulation of cell growth | IDA | biological_process |
| GO:0045893 | Positive regulation of transcription, DNA-templated | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4011261274 | 0.0466720109 | 0.9999902473 | 0.4052966018 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0553216961 |
| GSE13712_SHEAR | Up | 0.4786074427 |
| GSE13712_STATIC | Up | 0.3024643466 |
| GSE19018 | Down | -0.0454675960 |
| GSE19899_A1 | Down | -0.6275548823 |
| GSE19899_A2 | Down | -0.5470091334 |
| PubMed_21979375_A1 | Down | -0.4659717781 |
| PubMed_21979375_A2 | Down | -0.1258267273 |
| GSE35957 | Down | -0.5921637151 |
| GSE36640 | Down | -0.0471581226 |
| GSE54402 | Up | 0.1533178803 |
| GSE9593 | Down | -0.2203241798 |
| GSE43922 | Up | 0.0348934816 |
| GSE24585 | Up | 0.5034889394 |
| GSE37065 | Up | 0.0334780384 |
| GSE28863_A1 | Down | -0.0667444796 |
| GSE28863_A2 | Down | -0.6082975558 |
| GSE28863_A3 | Down | -0.6706428855 |
| GSE28863_A4 | Up | 0.2130370782 |
| GSE48662 | Up | 0.0932939237 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-7-5p | MIMAT0000252 | MIRT025961 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-18a-5p | MIMAT0000072 | MIRT031339 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049827 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-25-3p | MIMAT0000081 | MIRT050344 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
