HCSGD entry for TFPT

1. General information

Official gene symbolTFPT
Entrez ID29844
Gene full nameTCF3 (E2A) fusion partner (in childhood Leukemia)
Other gene symbolsFB1 INO80F amida
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003677DNA bindingIEA ISSmolecular_function
GO:0005515Protein bindingIPImolecular_function
GO:0005634NucleusIEA ISScellular_component
GO:0005737CytoplasmIEA ISScellular_component
GO:0005884Actin filamentIEAcellular_component
GO:0006281DNA repairIEAbiological_process
GO:0006310DNA recombinationIEAbiological_process
GO:0006351Transcription, DNA-templatedIEAbiological_process
GO:0006355Regulation of transcription, DNA-templatedIEAbiological_process
GO:0006915Apoptotic processIEAbiological_process
GO:0019901Protein kinase bindingIEAmolecular_function
GO:0031011Ino80 complexIDAcellular_component
GO:0043065Positive regulation of apoptotic processIEAbiological_process
GO:0046982Protein heterodimerization activityIEAmolecular_function
GO:0097190Apoptotic signaling pathwayIDAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.00675681780.91696043080.21592924761.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.7374406544
GSE13712_SHEARDown-0.4190897221
GSE13712_STATICUp0.0739194463
GSE19018Up0.0924831038
GSE19899_A1Up0.3546025636
GSE19899_A2Up1.6092168010
PubMed_21979375_A1Up0.8121984396
PubMed_21979375_A2Up0.8264499313
GSE35957Up0.3182356016
GSE36640Down-0.3846362315
GSE54402Up0.7270338124
GSE9593Up0.3437591321
GSE43922Up0.6798020447
GSE24585Down-0.0871599124
GSE37065Down-0.1950202765
GSE28863_A1Down-0.2208949139
GSE28863_A2Down-0.2176163659
GSE28863_A3Up0.5085289896
GSE28863_A4Up0.3351335714
GSE48662Up0.1364374105

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-26b-5pMIMAT0000083MIRT028955MicroarrayFunctional MTI (Weak)19088304
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.