HCSGD entry for REPIN1
1. General information
| Official gene symbol | REPIN1 |
|---|---|
| Entrez ID | 29803 |
| Gene full name | replication initiator 1 |
| Other gene symbols | AP4 RIP60 ZNF464 Zfp464 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005664 | Nuclear origin of replication recognition complex | TAS | cellular_component |
| GO:0005811 | Lipid particle | IEA | cellular_component |
| GO:0006260 | DNA replication | IEA | biological_process |
| GO:0022626 | Cytosolic ribosome | IEA | cellular_component |
| GO:0031965 | Nuclear membrane | IEA | cellular_component |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
| GO:2000191 | Regulation of fatty acid transport | IEA | biological_process |
| GO:2001273 | Regulation of glucose import in response to insulin stimulus | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8546119144 | 0.1694905437 | 0.9999902473 | 0.7962716937 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0153960264 |
| GSE13712_SHEAR | Down | -0.1047504425 |
| GSE13712_STATIC | Down | -0.1156797079 |
| GSE19018 | Down | -0.0041145240 |
| GSE19899_A1 | Down | -0.1313045967 |
| GSE19899_A2 | Up | 0.2892493662 |
| PubMed_21979375_A1 | Up | 0.1884046202 |
| PubMed_21979375_A2 | Up | 0.2372408143 |
| GSE35957 | Down | -0.2273324787 |
| GSE36640 | Up | 0.0961157719 |
| GSE54402 | Down | -0.0461083745 |
| GSE9593 | Down | -0.2459144317 |
| GSE43922 | Up | 0.0360499777 |
| GSE24585 | Down | -0.3007364704 |
| GSE37065 | Down | -0.0249098045 |
| GSE28863_A1 | Down | -0.2903354027 |
| GSE28863_A2 | Up | 0.3503857003 |
| GSE28863_A3 | Down | -0.5138094530 |
| GSE28863_A4 | Down | -0.3459604191 |
| GSE48662 | Up | 0.1534685582 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029596 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-320a | MIMAT0000510 | MIRT044714 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
