HCSGD entry for GTF2F2

1. General information

Official gene symbolGTF2F2
Entrez ID2963
Gene full namegeneral transcription factor IIF, polypeptide 2, 30kDa
Other gene symbolsBTF4 RAP30 TF2F2 TFIIF
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000398MRNA splicing, via spliceosomeTASbiological_process
GO:0003677DNA bindingIEAmolecular_function
GO:0005515Protein bindingIPImolecular_function
GO:0005524ATP bindingIEAmolecular_function
GO:0005634NucleusIDAcellular_component
GO:0005654NucleoplasmTAScellular_component
GO:0005674Transcription factor TFIIF complexIEAcellular_component
GO:0006355Regulation of transcription, DNA-templatedIEAbiological_process
GO:0006366Transcription from RNA polymerase II promoterTASbiological_process
GO:0006367Transcription initiation from RNA polymerase II promoterTASbiological_process
GO:0006368Transcription elongation from RNA polymerase II promoterTASbiological_process
GO:00063707-methylguanosine mRNA cappingTASbiological_process
GO:0008026ATP-dependent helicase activityIEAmolecular_function
GO:0008380RNA splicingTASbiological_process
GO:0010467Gene expressionTASbiological_process
GO:0015630Microtubule cytoskeletonIDAcellular_component
GO:0016032Viral processTASbiological_process
GO:0050434Positive regulation of viral transcriptionTASbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.73515952660.09881432700.99999024730.6013622890

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.5493501408
GSE13712_SHEARDown-0.0234297588
GSE13712_STATICUp0.0110232925
GSE19018Down-0.0216315497
GSE19899_A1Up0.3297138221
GSE19899_A2Down-0.1983087617
PubMed_21979375_A1Down-0.2630300332
PubMed_21979375_A2Down-0.7567255092
GSE35957Up0.1062837349
GSE36640Down-0.0189733929
GSE54402Down-0.3671458040
GSE9593Down-0.1773628531
GSE43922Down-0.1022264809
GSE24585Down-0.3501833305
GSE37065Down-0.1950511986
GSE28863_A1Down-0.2134407563
GSE28863_A2Down-0.0322746046
GSE28863_A3Up0.0754982166
GSE28863_A4Up0.0153908772
GSE48662Down-0.2826730393

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.