HCSGD entry for SCG3
1. General information
| Official gene symbol | SCG3 |
|---|---|
| Entrez ID | 29106 |
| Gene full name | secretogranin III |
| Other gene symbols | SGIII |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0002576 | Platelet degranulation | TAS | biological_process |
| GO:0005576 | Extracellular region | TAS | cellular_component |
| GO:0007596 | Blood coagulation | TAS | biological_process |
| GO:0030168 | Platelet activation | TAS | biological_process |
| GO:0030658 | Transport vesicle membrane | IEA | cellular_component |
| GO:0034774 | Secretory granule lumen | TAS | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3782041906 | 0.8484124957 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3532053631 |
| GSE13712_SHEAR | Down | -0.2737190835 |
| GSE13712_STATIC | Up | 0.1116743285 |
| GSE19018 | Up | 0.1209373942 |
| GSE19899_A1 | Up | 0.0502782361 |
| GSE19899_A2 | Down | -0.0569412683 |
| PubMed_21979375_A1 | Down | -0.0290073925 |
| PubMed_21979375_A2 | Up | 0.1455081460 |
| GSE35957 | Up | 0.2539144479 |
| GSE36640 | Up | 0.0393768909 |
| GSE54402 | Down | -0.1357141553 |
| GSE9593 | Down | -0.0168910482 |
| GSE43922 | Up | 0.0191538524 |
| GSE24585 | Up | 0.6228437744 |
| GSE37065 | Up | 0.0453295329 |
| GSE28863_A1 | Up | 0.0600709741 |
| GSE28863_A2 | Up | 0.0543713610 |
| GSE28863_A3 | Up | 0.0910151049 |
| GSE28863_A4 | Down | -0.1657244242 |
| GSE48662 | Down | -0.0774997104 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017386 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
