HCSGD entry for MRPL13
1. General information
| Official gene symbol | MRPL13 |
|---|---|
| Entrez ID | 28998 |
| Gene full name | mitochondrial ribosomal protein L13 |
| Other gene symbols | L13 L13A L13mt RPL13 RPML13 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003735 | Structural constituent of ribosome | IEA NAS | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005739 | Mitochondrion | IEA | cellular_component |
| GO:0005761 | Mitochondrial ribosome | IDA | cellular_component |
| GO:0005762 | Mitochondrial large ribosomal subunit | IDA NAS | cellular_component |
| GO:0005840 | Ribosome | IEA | cellular_component |
| GO:0006412 | Translation | IEA NAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9197697618 | 0.0987644124 | 0.9999902473 | 0.6011975254 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0254155517 |
| GSE13712_SHEAR | Down | -0.0561345129 |
| GSE13712_STATIC | Up | 0.0185861455 |
| GSE19018 | Up | 0.2013078028 |
| GSE19899_A1 | Down | -0.0863563014 |
| GSE19899_A2 | Down | -0.6834778581 |
| PubMed_21979375_A1 | Up | 0.1023913957 |
| PubMed_21979375_A2 | Down | -0.4425964311 |
| GSE35957 | Down | -0.6095944653 |
| GSE36640 | Down | -0.6405805895 |
| GSE54402 | Down | -0.1330079328 |
| GSE9593 | Down | -0.3200251144 |
| GSE43922 | Down | -0.0311322759 |
| GSE24585 | Down | -0.4377003799 |
| GSE37065 | Down | -0.0866407005 |
| GSE28863_A1 | Up | 0.3712322479 |
| GSE28863_A2 | Up | 0.2752065837 |
| GSE28863_A3 | Down | -0.2549993416 |
| GSE28863_A4 | Up | 0.1465932682 |
| GSE48662 | Down | -0.0575654386 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-215-5p | MIMAT0000272 | MIRT024315 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026575 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-20a-5p | MIMAT0000075 | MIRT050566 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
