HCSGD entry for C11orf54
1. General information
| Official gene symbol | C11orf54 |
|---|---|
| Entrez ID | 28970 |
| Gene full name | chromosome 11 open reading frame 54 |
| Other gene symbols | PTD012 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA IEA | cellular_component |
| GO:0008152 | Metabolic process | IDA | biological_process |
| GO:0008270 | Zinc ion binding | IDA | molecular_function |
| GO:0016788 | Hydrolase activity, acting on ester bonds | IDA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7577514342 | 0.0474960830 | 0.9999902473 | 0.4085749346 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.3793235506 |
| GSE13712_SHEAR | Down | -0.3725742462 |
| GSE13712_STATIC | Down | -0.1908869761 |
| GSE19018 | Up | 0.2763908076 |
| GSE19899_A1 | Down | -0.3935680250 |
| GSE19899_A2 | Down | -0.4102184661 |
| PubMed_21979375_A1 | Down | -0.2561633063 |
| PubMed_21979375_A2 | Down | -0.8481149764 |
| GSE35957 | Up | 0.1394203195 |
| GSE36640 | Up | 0.2288627483 |
| GSE54402 | Down | -0.2806025763 |
| GSE9593 | Down | -0.1526648368 |
| GSE43922 | Down | -0.7039064354 |
| GSE24585 | Up | 0.3854140930 |
| GSE37065 | Down | -0.0034044490 |
| GSE28863_A1 | Up | 0.2981035142 |
| GSE28863_A2 | Up | 0.3938848922 |
| GSE28863_A3 | Down | -0.4504893348 |
| GSE28863_A4 | Up | 0.0706937656 |
| GSE48662 | Up | 0.0552440681 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017483 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-375 | MIMAT0000728 | MIRT019767 | Microarray | Functional MTI (Weak) | 20215506 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
