HCSGD entry for SLC6A16
1. General information
| Official gene symbol | SLC6A16 |
|---|---|
| Entrez ID | 28968 |
| Gene full name | solute carrier family 6, member 16 |
| Other gene symbols | NT5 NTT5 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005326 | Neurotransmitter transporter activity | NAS | molecular_function |
| GO:0005328 | Neurotransmitter:sodium symporter activity | IEA | molecular_function |
| GO:0005622 | Intracellular | NAS | cellular_component |
| GO:0006836 | Neurotransmitter transport | NAS | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8390422514 | 0.4722627104 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0373580547 |
| GSE13712_SHEAR | Down | -0.0227688210 |
| GSE13712_STATIC | Down | -0.0674759387 |
| GSE19018 | Up | 0.1030802915 |
| GSE19899_A1 | Up | 0.1082658127 |
| GSE19899_A2 | Down | -0.1522414758 |
| PubMed_21979375_A1 | Down | -0.6050075414 |
| PubMed_21979375_A2 | Down | -0.1132346160 |
| GSE35957 | Down | -0.2809957734 |
| GSE36640 | Down | -0.0204802208 |
| GSE54402 | Up | 0.0289297180 |
| GSE9593 | Up | 0.0863721417 |
| GSE43922 | Up | 0.0131718891 |
| GSE24585 | Down | -0.2181126697 |
| GSE37065 | Up | 0.1789453618 |
| GSE28863_A1 | Up | 0.0351895417 |
| GSE28863_A2 | Up | 0.0057363537 |
| GSE28863_A3 | Up | 0.2310588230 |
| GSE28863_A4 | Up | 0.0535798273 |
| GSE48662 | Down | -0.0960791445 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018187 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-34a-5p | MIMAT0000255 | MIRT025508 | Proteomics | Functional MTI (Weak) | 21566225 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029566 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
