HCSGD entry for SLC27A6
1. General information
| Official gene symbol | SLC27A6 |
|---|---|
| Entrez ID | 28965 |
| Gene full name | solute carrier family 27 (fatty acid transporter), member 6 |
| Other gene symbols | ACSVL2 FACVL2 FATP6 VLCS-H1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000038 | Very long-chain fatty acid metabolic process | TAS | biological_process |
| GO:0000166 | Nucleotide binding | IEA | molecular_function |
| GO:0001676 | Long-chain fatty acid metabolic process | TAS | biological_process |
| GO:0004467 | Long-chain fatty acid-CoA ligase activity | TAS | molecular_function |
| GO:0005886 | Plasma membrane | TAS | cellular_component |
| GO:0015909 | Long-chain fatty acid transport | TAS | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0031957 | Very long-chain fatty acid-CoA ligase activity | IEA | molecular_function |
| GO:0042383 | Sarcolemma | IEA | cellular_component |
| GO:0055085 | Transmembrane transport | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1004562099 | 0.8600506136 | 0.6611970750 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1551075503 |
| GSE13712_SHEAR | Up | 0.1319314378 |
| GSE13712_STATIC | Down | -0.0424033928 |
| GSE19018 | Down | -0.0831074086 |
| GSE19899_A1 | Down | -0.0036043521 |
| GSE19899_A2 | Down | -0.1937586313 |
| PubMed_21979375_A1 | Down | -0.1146730208 |
| PubMed_21979375_A2 | Up | 0.1369617365 |
| GSE35957 | Up | 0.1807014191 |
| GSE36640 | Up | 0.2246689643 |
| GSE54402 | Up | 0.0531425167 |
| GSE9593 | Up | 0.0058976117 |
| GSE43922 | Up | 0.0069805863 |
| GSE24585 | Up | 4.3463660566 |
| GSE37065 | Down | -0.0483092266 |
| GSE28863_A1 | Down | -0.0318217079 |
| GSE28863_A2 | Up | 0.1147886083 |
| GSE28863_A3 | Up | 0.0649336939 |
| GSE28863_A4 | Down | -0.1116806514 |
| GSE48662 | Up | 0.0379169135 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017231 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029105 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
