HCSGD entry for YIPF6
1. General information
| Official gene symbol | YIPF6 |
|---|---|
| Entrez ID | 286451 |
| Gene full name | Yip1 domain family, member 6 |
| Other gene symbols | FinGER6 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005783 | Endoplasmic reticulum | IDA | cellular_component |
| GO:0005801 | Cis-Golgi network | IEA | cellular_component |
| GO:0005802 | Trans-Golgi network | IEA | cellular_component |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0030134 | ER to Golgi transport vesicle | IEA | cellular_component |
| GO:0042802 | Identical protein binding | IEA | molecular_function |
| GO:0060576 | Intestinal epithelial cell development | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0035997834 | 0.9959189241 | 0.1626594178 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3740903375 |
| GSE13712_SHEAR | Down | -0.0412322444 |
| GSE13712_STATIC | Up | 0.0375845740 |
| GSE19018 | Up | 0.0686821511 |
| GSE19899_A1 | Up | 0.6895000296 |
| GSE19899_A2 | Up | 0.9941476261 |
| PubMed_21979375_A1 | Up | 0.8347403395 |
| PubMed_21979375_A2 | Up | 1.4817308255 |
| GSE35957 | Up | 0.3012023687 |
| GSE36640 | Up | 1.1919210888 |
| GSE54402 | Up | 0.0751130297 |
| GSE9593 | Up | 0.3246143063 |
| GSE43922 | Up | 0.8144918306 |
| GSE24585 | Up | 0.2630778930 |
| GSE37065 | Up | 0.1281449419 |
| GSE28863_A1 | Up | 0.3992338865 |
| GSE28863_A2 | Up | 0.6419701776 |
| GSE28863_A3 | Down | -0.2250087482 |
| GSE28863_A4 | Up | 0.1623306190 |
| GSE48662 | Down | -0.0219165702 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-652-3p | MIMAT0003322 | MIRT039510 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT039675 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
