HCSGD entry for LSMEM1
1. General information
| Official gene symbol | LSMEM1 |
|---|---|
| Entrez ID | 286006 |
| Gene full name | leucine-rich single-pass membrane protein 1 |
| Other gene symbols | C7orf53 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0784937730 | 0.9616619011 | 0.5909709954 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1006357348 |
| GSE13712_SHEAR | Up | 0.2482610781 |
| GSE13712_STATIC | Down | -0.0869957575 |
| GSE19018 | Down | -0.0266909703 |
| GSE19899_A1 | Up | 0.1689820415 |
| GSE19899_A2 | Up | 0.1639951609 |
| PubMed_21979375_A1 | Up | 0.7928011083 |
| PubMed_21979375_A2 | Up | 0.0155485521 |
| GSE35957 | Down | -0.0063627718 |
| GSE36640 | Up | 0.5271113520 |
| GSE54402 | Up | 0.3414057053 |
| GSE9593 | Down | -0.0017560961 |
| GSE43922 | Up | 0.5218830257 |
| GSE24585 | Up | 0.1177505499 |
| GSE37065 | Up | 0.1479443671 |
| GSE28863_A1 | Down | -0.2511076922 |
| GSE28863_A2 | Up | 0.4080027922 |
| GSE28863_A3 | Down | -0.0628187284 |
| GSE28863_A4 | Down | -0.0319191450 |
| GSE48662 | Up | 0.1882557456 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018640 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
