HCSGD entry for SREK1IP1
1. General information
| Official gene symbol | SREK1IP1 |
|---|---|
| Entrez ID | 285672 |
| Gene full name | SREK1-interacting protein 1 |
| Other gene symbols | P18SRP SFRS12IP1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0006397 | MRNA processing | IEA | biological_process |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0008380 | RNA splicing | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0361778808 | 0.4107300520 | 0.4322460281 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.6889024096 |
| GSE13712_SHEAR | Down | -0.3070886421 |
| GSE13712_STATIC | Down | -0.7661127786 |
| GSE19018 | Up | 0.1392173419 |
| GSE19899_A1 | Up | 0.4033690788 |
| GSE19899_A2 | Up | 0.4170053111 |
| PubMed_21979375_A1 | Up | 1.0869404044 |
| PubMed_21979375_A2 | Up | 0.5595641142 |
| GSE35957 | Up | 0.1170739578 |
| GSE36640 | Up | 0.3439131051 |
| GSE54402 | Up | 0.9804933393 |
| GSE9593 | Down | -0.0125442616 |
| GSE43922 | Up | 0.2316852273 |
| GSE24585 | Down | -0.0811963714 |
| GSE37065 | Up | 0.2000179495 |
| GSE28863_A1 | Down | -0.1754714121 |
| GSE28863_A2 | Up | 0.2861722866 |
| GSE28863_A3 | Down | -0.9000482137 |
| GSE28863_A4 | Down | -0.3099099313 |
| GSE48662 | Down | -0.1717308723 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-421 | MIMAT0003339 | MIRT016115 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-101-3p | MIMAT0000099 | MIRT027283 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029124 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-let-7d-5p | MIMAT0000065 | MIRT032136 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-935 | MIMAT0004978 | MIRT036681 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-100-5p | MIMAT0000098 | MIRT048385 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049843 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
