HCSGD entry for SUMF1
1. General information
| Official gene symbol | SUMF1 |
|---|---|
| Entrez ID | 285362 |
| Gene full name | sulfatase modifying factor 1 |
| Other gene symbols | AAPA3037 FGE |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005788 | Endoplasmic reticulum lumen | TAS | cellular_component |
| GO:0006665 | Sphingolipid metabolic process | TAS | biological_process |
| GO:0006687 | Glycosphingolipid metabolic process | TAS | biological_process |
| GO:0016491 | Oxidoreductase activity | IEA | molecular_function |
| GO:0042803 | Protein homodimerization activity | IEA | molecular_function |
| GO:0043687 | Post-translational protein modification | TAS | biological_process |
| GO:0044267 | Cellular protein metabolic process | TAS | biological_process |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5012481631 | 0.0454651457 | 0.9999902473 | 0.4004980254 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2053379265 |
| GSE13712_SHEAR | Down | -0.7395103356 |
| GSE13712_STATIC | Down | -0.4291792363 |
| GSE19018 | Up | 0.3607228799 |
| GSE19899_A1 | Down | -1.0006497376 |
| GSE19899_A2 | Down | -0.2065944112 |
| PubMed_21979375_A1 | Down | -0.7809022620 |
| PubMed_21979375_A2 | Down | -0.0101579503 |
| GSE35957 | Up | 0.7293618020 |
| GSE36640 | Up | 0.6545413550 |
| GSE54402 | Down | -0.8209120775 |
| GSE9593 | Up | 0.9107047040 |
| GSE43922 | Down | -0.0448901614 |
| GSE24585 | Down | -0.0157593709 |
| GSE37065 | Down | -0.0539983431 |
| GSE28863_A1 | Down | -0.0417774326 |
| GSE28863_A2 | Up | 0.0511745174 |
| GSE28863_A3 | Down | -0.0885942665 |
| GSE28863_A4 | Down | -0.1984452630 |
| GSE48662 | Up | 0.2685911495 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-148b-3p | MIMAT0000759 | MIRT019314 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-106b-5p | MIMAT0000680 | MIRT020442 | Microarray | Functional MTI (Weak) | 17242205 |
| hsa-miR-128-3p | MIMAT0000424 | MIRT022044 | Microarray | Functional MTI (Weak) | 17612493 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
