HCSGD entry for CDH19

1. General information

Official gene symbolCDH19
Entrez ID28513
Gene full namecadherin 19, type 2
Other gene symbolsCDH7 CDH7L2
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005509Calcium ion bindingIEAmolecular_function
GO:0005886Plasma membraneIEAcellular_component
GO:0007156Homophilic cell adhesionIEAbiological_process
GO:0016021Integral component of membraneIEAcellular_component
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.86725166220.80484525660.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0692383030
GSE13712_SHEARUp0.0137707843
GSE13712_STATICDown-0.0481769567
GSE19018Up0.0576180250
GSE19899_A1Up0.0296239231
GSE19899_A2Up0.0403691442
PubMed_21979375_A1Up0.1817323578
PubMed_21979375_A2Up0.0390343335
GSE35957Up0.0587472024
GSE36640Down-0.0036395929
GSE54402Up0.0354689781
GSE9593Down-0.0238867059
GSE43922Up0.0163694526
GSE24585Down-0.2068586610
GSE37065Down-0.0216790598
GSE28863_A1Down-0.0373506229
GSE28863_A2Up0.0254299237
GSE28863_A3Up0.1181525464
GSE28863_A4Up0.0578662280
GSE48662Up0.0158387910

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-335-5pMIMAT0000765MIRT018515MicroarrayFunctional MTI (Weak)18185580
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.