HCSGD entry for KCTD1
1. General information
| Official gene symbol | KCTD1 |
|---|---|
| Entrez ID | 284252 |
| Gene full name | potassium channel tetramerisation domain containing 1 |
| Other gene symbols | C18orf5 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003714 | Transcription corepressor activity | IDA | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0008134 | Transcription factor binding | IPI | molecular_function |
| GO:0045892 | Negative regulation of transcription, DNA-templated | IDA | biological_process |
| GO:0051260 | Protein homooligomerization | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3346862695 | 0.9409182668 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1498328082 |
| GSE13712_SHEAR | Down | -0.1326619976 |
| GSE13712_STATIC | Up | 0.1979435568 |
| GSE19018 | Up | 0.0989102860 |
| GSE19899_A1 | Up | 0.0414568117 |
| GSE19899_A2 | Up | 0.1618559503 |
| PubMed_21979375_A1 | Up | 0.0702856144 |
| PubMed_21979375_A2 | Up | 0.1646354302 |
| GSE35957 | Up | 0.0406132095 |
| GSE36640 | Down | -0.0472639841 |
| GSE54402 | Down | -0.1429623029 |
| GSE9593 | Up | 0.1141731762 |
| GSE43922 | Up | 0.0499258951 |
| GSE24585 | Up | 0.2638052450 |
| GSE37065 | Up | 0.0386630145 |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Up | 0.2337187444 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-196a-5p | MIMAT0000226 | MIRT048196 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7a-5p | MIMAT0000062 | MIRT052617 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
